RIP-PEN-seq

A method for RNA immunoprecipitation coupled with sequencing of paired ends of ncRNAs

RIP-PEN-SHAPE-MaP

An approach combining SHAPE-MaP and RIP-PEN-seq experiments to probe intact RNA structures of sprcific RNAs

irPE (infrared primer extension)

A method confirmed that the sprcific residue in RNA is 2′-O-methylated in cells

RIP-infrared-CLASH

Identify the interactions between different RNAs

PEN-seq

A high-throughput sequencing method to identify the full-length sequences of RNAs

NAP-seq

A method to globally profile the full-length sequences of napRNAs with various terminal modifications at single-nucleotide resolution

NAP-seq-TGS

Sequencing napRNAs on the Oxford Nanopore platform

Nm-REP-seq

Single-base resolution mapping of 2′-O-methylation sites by an exoribonuclease-enriched chemical method

NAP-SHAPE-MaP

An approach combining SHAPE-MaP and NAP-seq to probe intact RNA structures of napRNAs

Nm-3term-seq

A high-throughput sequencing method for identifying 2′-O-methylation at 3'end of multiple types of RNAs