RBP: all
CLIP-Data >= 1
pan-Cancer >= 0
target: L2

The RBP-caRNA Interactions Supported by CLIP-seq Data

Download: EXCEL TXT
RBP GeneID GeneName GeneType ClusterNum ClipExpNum ClipSiteNum lineID
RBP GeneID GeneName GeneType ClusterNum ClipExpNum ClipSiteNum lineID

Description:

Here, we presented the RBP-RNA interactions supported by the binding sites of RBPs derived from CLIP-seq data. All identified binding sites within 200bp of a RBP will be defined as a RBP-binding cluster.

Please note that 'NA' values in HepG2(shRNA/CRISPR) or K562(shRNA/CRISPR) columns mean that there were no siginificant (FDR <= 0.1) changes of gene expressions detected following RBP silcencing (knockout) or the RNA-seq data of RBP silencing (knockout) were not available.


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Select the RBP: all
Select the target: L2
Refine results with high stringency of CLIP Data: 3
Explore the interaction of miRNA-caRNA with Pan-Cancer analysis: 5
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