Rank | MotifSeqLogo | MotifSeq | TargetNum | Target(%) | BackgroundNum | Background(%) | log10(pval) | PWM | Region | |
---|---|---|---|---|---|---|---|---|---|---|
Rank | MotifSeqLogo | MotifSeq | TargetNum | Target(%) | BackgroundNum | Background(%) | log10(pval) | PWM | Region |
Gene Expression Omnibus (GEO), GSM2585816
Reference:Courtney DG, et al., Cell Host Microbe 2017 [ link to PubMed: 28910636 ]
Here, we presented the binding motifs of RBPs that were de novo identified from their CLIP-seq peak data by using homer software.
Select a RBP parameter to browse the binding motifs of a particular RBP.
Select a Cell line/Tissue parameter to retrive the binding motifs for a cell line/tissue.
Select the Sample parameter to focus on the specific experiment condition.
Select the Motif length parameter to focus on the specific motif length. Note: short motif refers to 4-6 nt, while long motif refers to 7-10 nt.
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